Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944931.1_cds_XP_016487627.1_78341
CDS Infomation

[gene=LOC107807704] [db_xref=GeneID:107807704] [protein=protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like] [protein_id=XP_016487627.1] [location=complement(join(126474..127356,127557..128218))] [gbkey=CDS]
Sequence

ATGGATCCTGATGACAGTCTTAGTGAAGATCCTTGGACAAAGTCGTCTTCAGCTGGCAAT
GAATTACTGAAAATTGTGCCCTCAGATAACCATTCATTTACCAATTTCAATCTGCACGCG
CAGAAGTGGGAAGGTTCCTCTTATTTGGATCAACAGACCAGGATTGAGCAACAGTTTTCT
GGATTTACTCAACCAAAACACACATATCAGATGGATCAACATGGGAATCAGATGAATGAA
AATCATGACTCAACCAGAACAAAGGACTGGGATCCAAGTACTTTGCTAAACAACCTTTCG
TTTCTCGAGCAAAAGATTCATCAGCTCCAGGAACTAGTACATTTGATTGTTGGGCGGAGA
GGTCAGACTGGGCTTCAGGGAAATGACCTTATAGTTCAGCAGCAACAGTTAATCACAGCG
GACCTTACTTCTATTATAGTCCAATTGGTATCAACTGCAGGAAGTCTTCTTCCAACTATG
AAGCGCACACTTTCCTCCGTGAGCCCTGCTGCTAGCCAACTTGTGCAGTTTGGTGGCGTC
ACAGTTCCTTCTGCAACATGTACTAATGGCGGGGGACTGCCATGTAATGATGGCGGTGTT
ACTAAAGTGGAAGATCAGTCAAACCACGTTGACCAGTTGAGAGATTGTGGGATTGAACAA
AACCATGCTGTTGATGGACATGAATCAAAAGATGAAGATGAAGCTGAGGAAGAAGAGAAC
CTTCCTCCCGGTTCCTATGAGATTCTGCAGTTGGAGAAGGAGGAAATCCTTGCACCACAC
ACTCACTTTTGCACAATTTGTGGCAAGGGATTTAAGAGGGATGCCAATTTGCGGATGCAC
ATGAGAGGTCATGGTGATGAGTACAAGACTCCAGCAGCTCTTGCAAAGCCTCATAAAGAA
CCAAGCTCCGAGCCAACACTCATCAAAAGGTATTCCTGTCCTTATGTTGGATGCAAGCGC
AATAAGGAGCATAAGAAGTTTCAGCCTCTGAAGACGATCTTATGTGTGAAAAACCATTAC
AAGAGAACCCACTGTGAGAAAGCCTATACTTGCAGTAGATGTAATATAAAGAAATTTTCT
GTTATTGCTGATCTTAAAACACATGAAAAGCATTGTGGTAAAGATAAATGGCTTTGTTCC
TGCGGAACAACATTTTCTAGGAAAGATAAGCTTTTCGGACACATTGCCCTTTTTCAAGGT
CATACTCCTGCAGTTCCACTGGATGAAACTAAAGGATCTGCTGGGACATCTGACCGAGGC
CAAACAAGTGAAGTCACCATGAAAGCACGACAAGAAGATTTTAAGGTAAATGCTTCACAT
GGCAATGAGTTTCAAAATCCCAGGGATATAAAAAGCGCTGCAGATGATCCAGGCAGTTAT
TTCTCGCCTTTGAACTTTGATACTAGCAATCTTAATGGATTTCAAGAGTTCCCTCGACCA
CCATTTGACGAGTCAGATAGCTCATTCTCGTTTCTGCTATCTGGATCATGTGAATACCCT
CCTCACAAGGCTGCAAAATATATGAGTTCTAGTGAACTGGAATAA

Peptide Sequence

PEP ID

XP_016487627.1
PEP Infomation

PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Nicotiana tabacum]
Sequence

MDPDDSLSEDPWTKSSSAGNELLKIVPSDNHSFTNFNLHAQKWEGSSYLDQQTRIEQQFS
GFTQPKHTYQMDQHGNQMNENHDSTRTKDWDPSTLLNNLSFLEQKIHQLQELVHLIVGRR
GQTGLQGNDLIVQQQQLITADLTSIIVQLVSTAGSLLPTMKRTLSSVSPAASQLVQFGGV
TVPSATCTNGGGLPCNDGGVTKVEDQSNHVDQLRDCGIEQNHAVDGHESKDEDEAEEEEN
LPPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTPAALAKPHKE
PSSEPTLIKRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRTHCEKAYTCSRCNIKKFS
VIADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIALFQGHTPAVPLDETKGSAGTSDRG
QTSEVTMKARQEDFKVNASHGNEFQNPRDIKSAADDPGSYFSPLNFDTSNLNGFQEFPRP
PFDESDSSFSFLLSGSCEYPPHKAAKYMSSSELE

Transcript Sequence

Gene sequence data has not been registered.